Raphe Nuclei
Hierarchy level in atlas is 2: 1 superstructures include it.
abbreviation: RAAbbreviation
RA
Species
Mouse
Description of part
Collator note: we introduce this term based on the rat brain parcellation Swanson 1992. This term also appears in the rat brain atlases Paxinos and Watson 1986 and 1998
Part type
gray matter
Nomenclature
Paxinos/Franklin-2001
Endorsement
The approach used by the collator Mihail Bota is not endorsed by the author of the nomenclature.
Collator argument
The hierarchy of this region was constructed using the rat brain atlases Swanson 1992, and Paxinos and Watson 1986.
Reference
Author:
Paxinos G., Franklin K.B.J.
Title of Book:
The mouse brain in stereotaxic coordinates.
Year:
2001
Pages:
15-60
Edition:
2nd
Publisher:
Academic Press
- Hindbrain
- accessory abducens/facial nucleus
- gigantocellular reticular nucleus
- spinal trigeminal nucleus oral part
- parasolitary nucleus
- motor trigeminal nucleus
- parvicellular motor trigeminal nucleus
- epirubrospinal nucleus
- medial rostroventrolateral medulla
- vestibulocochlear ganglion
- nucleus of the trapezoid body
- medullary reticular nucleus dorsal part
- laterodorsal tegmental nucleus
- facial nucleus
- gracile nucleus
- nucleus of Darkschewitsch
- Raphe nuclei
- dorsal cochlear nucleus
- trochlear nucleus
- caudal periolivary nucleus
- reticulotegmental nucleus of the pons
- nucleus O
- root of abducens nerve
- central gray beta part
- prerubral field
- median accessory nucleus of the medulla
- trigeminal ganglion
- caudoventrolateral reticular nucleus
- parvicellular reticular nucleus
- gelatinous layer of the caudal spinal trigeminal nucleus
- medullary reticular nucleus ventral part
- superior vestibular nucleus
- ambiguus nucleus
- spinal vestibular nucleus
- dorsal tegmental nucleus
- superficial glial zone of the cochlear nuclei
- superior paraolivary nucleus
- subcoeruleus nucleus dorsal part
- nucleus X
- accessory facial nucleus
- ventral cochlear nucleus
- nucleus Y
- supratrigeminal nucleus
- paratrigeminal nucleus
- accessory trigeminal nucleus
- lateroventral periolivary nucleus
- area postrema
- paramedian reticular nucleus
- central gray alpha part
- subcoeruleus nucleus alpha part
- paranigral nucleus
- nucleus of the solitary tract
- nucleus of the solitary tract medial part
- nucleus of the solitary tract central part
- nucleus of the solitary tract ventrolateral part
- nucleus of the solitary tract intermediate part
- nucleus of the solitary tract dorsomedial part
- nucleus of the solitary tract interstitial part
- nucleus of the solitary tract commissural part
- nucleus of the solitary tract rostrolateral part1-10
- medial superior olive
- B4 serotonin cells
- hypoglossal nucleus
- gracile fasciculus
- cuneate nucleus
- rostral periolivary region
- dorsomedial spinal trigeminal nucleus
- nucleus of origin of efferents of the vestibular nerve
- Precerebellar nuclei
- lateral reticular nucleus
- pontine nuclei
- inferior olive
- intermedius nucleus of the medulla
- intercalated nucleus of the medulla
- central gray of the pons
- Botzinger complex
- C3 adrenaline cells
- principal sensory trigeminal nucleus
- C2 adrenaline cells
- medial vestibular nucleus
- red nucleus
- locus coeruleus
- F cell group of the vestibular complex
- dorsal paragigantocellular nucleus
- cerebellum
- copula of the pyramis
- lateral (dentate) cerebellar nucleus
- 7th Cerebellar lobule
- anterior lobe of cerebellum
- 6th Cerebellar lobule
- paraflocculus
- flocculus
- cerebellar commissure
- paramedian lobule
- medial (fastigial) cerebellar nucleus
- 8th Cerebellar lobule
- simple lobule
- Interposed cerebellar nucleus
- vestibulocerebellar nucleus
- infracerebellar nucleus
- middle cerebellar peduncle
- superior cerebellar peduncle (brachium conjunctivum)
- 10th Cerebellar lobule
- parafloccular sulcus
- uvula cerebellum
- lateral superior olive
- subcoeruleus nucleus ventral part
- dorsal periolivary region
- spinal trigeminal nucleus caudal part
- medial accessory oculomotor nucleus
- parabrachial nucleus
- noradrenaline/adrenaline cells nucleus
- Barrington nucleus
- dorsal motor nucleus of vagus
- sphenoid nucleus
Major subparts
| Name | Type |
| paramedian raphe nucleus | gray matter |
| raphe magnus nucleus | gray matter |
| caudal linear nucleus of the raphe | gray matter |
| B9 serotonin cells | gray matter |
| raphe interpositus nucleus | gray matter |
| dorsal raphe nucleus | gray matter |
| raphe pallidus nucleus | gray matter |
| raphe cap | gray matter |
| median raphe nucleus | gray matter |
| raphe obscurus nucleus | gray matter |
| rostral linear nucleus of the raphe | gray matter |
