Publications directly related to BAMS

• Bota M. & Swanson L.W. (2008). BAMS Neuroanatomical Ontology: design and implementation, Frontiers in Neuroinformatics (in press). - Description of BAMS Ontology.
• Bota M. & Swanson L.W. (2007). The neuron classification problem, Brain Res Rev May 26. - Description of a new method of neurons classification, and of the BAMS Neuron Ontology module.
• Bota M. & Swanson L.W. (2007). Online workbenches for neural network connections, J Comp Neurol 500(5):807-814. - Review of the most important online neuroinformatics systems.
• Bota M. & Swanson L.W. (2006). A new module for on-line manipulation and display of molecular information in the Brain Architecture management System, Neuroinformatics 4(4):275-298. - Description of BAMS Molecules module.
• Bota M., Dong H.-W. & Swanson L.W. (2005). Brain Architecture Management System, Neuroinformatics 3(1):15-48. - Description of BAMS general structure and functionality.
• Bota M., Dong H.-W. & Swanson L.W. (2003). From gene networks to brain networks, Nat Neurosci 6(8):795-799.

Publications that refer to BAMS

• Dinov I.D. et al. (2006). LONI visualization environment, J Digit Imaging 19(2): 148-58.
• Mackenzie-Graham A. et al. (2004). A multimodal, multidimensional atlas of the C57BL/6J mouse brain, J Anat 204(2):93-102.
• Mackenzie-Graham A. et al. (2003). The informatics of a C57BL/6J mouse brain atlas, Neuroinformatics 1(4): 397-410.
• Larson S.D. & Martone M.E. (2007). Rule-Based Reasoning with a Multi-Scale Neuroanatomical Ontology, OWL: Experiences and Directions, Innsbruck, Austria, CEUR Workshop Proceedings, ISSN 1613-0073.

Publications historically related to BAMS

• Bota M. & Arbib. M.A. (2004). Integrating databases and expert systems for the analysis of brain structures: connections, similarities, and homologies, Neuroinformatics 2(1): 19-58. - Description of structure and functionality of the Neurohomology Database.